Run experiment comparing different versions of ROBOKOP in a standalone and integrated KG #151 and #156 in Lab Notebooks Repo
Implement almost pure rank based frequent flyers matrix transformation in pipeline run here
Follow-up experiment from filtering_versions_robokop examining if filtering ROBOKOP in an integrated KG improves performance. Baseline RTX [notebook here] (https://github.com/everycure-org/lab-notebooks/blob/robokop-integrated-kg-experiment/cross-kg-modelling/robokop_integrated_versions.ipynb)
Follow-up experiment from filtering_versions_robokop examining if filtering ROBOKOP in an integrated KG improves performance. Unfiltered Robokop version notebook here
Follow-up experiment from filtering_versions_robokop examining if filtering ROBOKOP in an integrated KG improves performance. Filtered ROBOKOP version notebook here
Disease split experiment using TxGNN disease groups with negatives synthesised as per our typical pipeline (eg randomly) + XGB notebook here
Disease split experiment using TxGNN disease groups with new implementation of negative sampling to simulate a zero shot scenario + XGB notebook here
Run experiment comparing different versions of ROBOKOP in a standalone and integrated KG #151 and #156 in Lab Notebooks Repo