MATRIX
The MATRIX pipeline is our main codebase in the Every Cure organization. Its goal is the generation of high accuracy predictions of drug-disease pairs in an "all vs all" approach. For this, we ingest and integrate a number of data sources, build models and make predictions on the ingested data.
You can find more details about the pipeline stages here:
- Ingestion
- Integration
- Filtering
- Embedding
- Modelling
- Matrix generation
- Matrix transformation
- Evaluation
Of course there is a lot more to this but the below illustration aims to sketch the high level flow of the pipeline:
